The ModeShape 'with-dependencies' JAR files contain JAR files but should be unpacked

We created additional artifacts (using the 'with-dependencies' classifier) for all of the ModeShape extensions and the 'modeshape-jcr' module that included all dependencies, making it easier for people that want to use ModeShape but don't use Maven. For example, the 'modeshape-jcr-

-with-dependencies.jar' (since the extensions are expected to be used with the ModeShape JCR JAR file).

The problem is that these "-with-dependency" JAR files contain the JARs of the dependencies, and so they have to be extracted in order to be used. We should instead follow the standard "jar-with-dependencies" assembly descriptor and make these JAR files contain the unpacked JARs, so the "-with-dependency" JARs can simply be placed on the classpath and used as-is.

Additionally, we should conform to the standard "jar-with-dependency" classifier (rather than the "with-dependency"). We could use the standard "jar-with-dependencies" assembly descriptor (which includes *all* dependencies), but then resulting JARs for our extension modules (e.g., sequencers, connectors, etc.) would each contain copies of ModeShape's core modules (e.g., "modeshape-graph", "modeshape-common", and their dependencies). We don't want to do this, so we still need to have custom assembly descriptors - they just need to be named correctly.