I installed JBDS with the universal installer (Beta1-v20130519-0601-B206) and did not set up runtime detection.

On every IDE start, the runtime detection prompt is now displayed (screen capture attached). Not sure if this is a bug or desired behavior.

If it is desired behavior, I can understand showing the prompt on the first start after an install to encourage users to use this function. But showing it on every start is annoying, particularly if a user does not want to use runtime detection.